Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDPRPyruvate dehydrogenase phosphatase regulatory subunit. (758 aa)    
Predicted Functional Partners:
GLDC
Glycine decarboxylase.
  
 0.959
ENSNVIP00000026051
annotation not available
  
 0.951
GART
annotation not available
  
 
 0.912
PDP2
Pyruvate dehyrogenase phosphatase catalytic subunit 2.
   
 0.909
PDP1
Pyruvate dehyrogenase phosphatase catalytic subunit 1.
   
 0.908
PDHX
Pyruvate dehydrogenase complex component X.
  
 
 0.849
PIPOX
Pipecolic acid and sarcosine oxidase.
  
 0.830
NUDCD1
NudC domain containing 1.
    
   0.829
ENSNVIP00000015541
annotation not available
   
 
 0.827
ENSNVIP00000002172
annotation not available
  
 
 0.822
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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