Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHL1Cell adhesion molecule L1 like. (1164 aa)    
Predicted Functional Partners:
CNTN1
Contactin 1.
   
 0.925
CNTN2
Contactin 2.
   
 0.822
NRP1
Neuropilin 1.
    
 0.815
NRP2
Neuropilin 2.
   
 0.755
CNTN6
Contactin 6.
   
 0.751
NFASC
Neurofascin.
   
 0.709
ANK1
Ankyrin 1.
   
 0.657
ANK3
Ankyrin 3.
   
 0.657
ANK2
Ankyrin 2.
   
 0.657
L1CAM
L1 cell adhesion molecule.
    
   0.628
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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