STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HECTD1HECT domain E3 ubiquitin protein ligase 1. (2610 aa)    
Predicted Functional Partners:
UBR3
Ubiquitin protein ligase E3 component n-recognin 3.
   
  
 0.856
TRIP12
Thyroid hormone receptor interactor 12.
   
  
0.845
UBR2
Ubiquitin protein ligase E3 component n-recognin 2.
   
  
 0.717
APC2
APC regulator of WNT signaling pathway 2.
  
 
 0.692
LTN1
Listerin E3 ubiquitin protein ligase 1.
   
  
 0.574
SACS
Sacsin molecular chaperone.
   
 
 0.568
UBR4
Ubiquitin protein ligase E3 component n-recognin 4.
   
  
 0.558
RNF146
Ring finger protein 146.
      
 0.538
AMOTL1
Angiomotin like 1.
    
 
 0.525
USP9X
Ubiquitin specific peptidase 9 X-linked.
   
   0.517
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.