STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP23ATP23 metallopeptidase and ATP synthase assembly factor homolog. (246 aa)    
Predicted Functional Partners:
CHCHD4
Coiled-coil-helix-coiled-coil-helix domain containing 4.
    
 
 0.813
MRPL20
Mitochondrial ribosomal protein L20.
   
    0.744
ENSNVIP00000008266
annotation not available
   
 
 0.721
PHB2
Prohibitin 2.
   
 
 0.718
ENSNVIP00000010288
Nucleoporin 35.
    
   0.687
TRMT5
tRNA methyltransferase 5.
      
 0.639
PUM2
Pumilio RNA binding family member 2.
    
   0.628
PUM1
Pumilio RNA binding family member 1.
    
   0.628
MIPEP
Mitochondrial intermediate peptidase.
      
 0.543
COA7
Cytochrome c oxidase assembly factor 7 (putative).
      
 0.541
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.