Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VPS11VPS11 core subunit of CORVET and HOPS complexes. (941 aa)    
Predicted Functional Partners:
VPS41
VPS41 subunit of HOPS complex.
   
 0.999
ENSNVIP00000021971
VPS18 core subunit of CORVET and HOPS complexes.
   
0.999
VPS39
VPS39 subunit of HOPS complex.
   
 0.999
VPS16
VPS16 core subunit of CORVET and HOPS complexes.
   
 0.999
TGFBRAP1
Transforming growth factor beta receptor associated protein 1.
   
 0.998
ENSNVIP00000023617
annotation not available
   
 0.998
ENSNVIP00000017209
annotation not available
    
 0.986
ENSNVIP00000024879
annotation not available
    
 0.986
ENSNVIP00000021876
annotation not available
   
 0.973
ENSNVIP00000017256
annotation not available
    
 0.972
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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