ENSNVIP00000004453 protein (Neovison vison) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

ENSNVIP00000004453

annotation not available (80 aa)

Predicted Functional Partners:

SNRPD2

0.998

SNRPD1

0.997

ENSNVIP00000027125

0.997

SNRPE

0.987

LSM7

0.985

ENSNVIP00000016071

0.984

ENSNVIP00000016348

0.983

ENSNVIP00000014897

0.980

ENSNVIP00000031893

0.980

LSM5

0.979

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSNVIP00000004453	ENSNVIP00000014897	ENSNVIP00000004453	ENSNVIP00000014897	annotation not available	annotation not available	0.980
ENSNVIP00000004453	ENSNVIP00000016071	ENSNVIP00000004453	ENSNVIP00000016071	annotation not available	LSM10, U7 small nuclear RNA associated.	0.984
ENSNVIP00000004453	ENSNVIP00000016348	ENSNVIP00000004453	ENSNVIP00000016348	annotation not available	annotation not available	0.983
ENSNVIP00000004453	ENSNVIP00000027125	ENSNVIP00000004453	ENSNVIP00000027125	annotation not available	Small nuclear ribonucleoprotein D3 polypeptide.	0.997
ENSNVIP00000004453	ENSNVIP00000031893	ENSNVIP00000004453	ENSNVIP00000031893	annotation not available	annotation not available	0.980
ENSNVIP00000004453	LSM5	ENSNVIP00000004453	ENSNVIP00000013515	annotation not available	LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.979
ENSNVIP00000004453	LSM7	ENSNVIP00000004453	ENSNVIP00000006621	annotation not available	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.985
ENSNVIP00000004453	SNRPD1	ENSNVIP00000004453	ENSNVIP00000022750	annotation not available	Small nuclear ribonucleoprotein D1 polypeptide.	0.997
ENSNVIP00000004453	SNRPD2	ENSNVIP00000004453	ENSNVIP00000011467	annotation not available	Small nuclear ribonucleoprotein D2 polypeptide.	0.998
ENSNVIP00000004453	SNRPE	ENSNVIP00000004453	ENSNVIP00000020972	annotation not available	Small nuclear ribonucleoprotein polypeptide E.	0.987
ENSNVIP00000014897	ENSNVIP00000004453	ENSNVIP00000014897	ENSNVIP00000004453	annotation not available	annotation not available	0.980
ENSNVIP00000014897	ENSNVIP00000016071	ENSNVIP00000014897	ENSNVIP00000016071	annotation not available	LSM10, U7 small nuclear RNA associated.	0.970
ENSNVIP00000014897	ENSNVIP00000016348	ENSNVIP00000014897	ENSNVIP00000016348	annotation not available	annotation not available	0.957
ENSNVIP00000014897	ENSNVIP00000027125	ENSNVIP00000014897	ENSNVIP00000027125	annotation not available	Small nuclear ribonucleoprotein D3 polypeptide.	0.994
ENSNVIP00000014897	LSM5	ENSNVIP00000014897	ENSNVIP00000013515	annotation not available	LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.965
ENSNVIP00000014897	LSM7	ENSNVIP00000014897	ENSNVIP00000006621	annotation not available	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.940
ENSNVIP00000014897	SNRPD1	ENSNVIP00000014897	ENSNVIP00000022750	annotation not available	Small nuclear ribonucleoprotein D1 polypeptide.	0.995
ENSNVIP00000014897	SNRPD2	ENSNVIP00000014897	ENSNVIP00000011467	annotation not available	Small nuclear ribonucleoprotein D2 polypeptide.	0.995
ENSNVIP00000016071	ENSNVIP00000004453	ENSNVIP00000016071	ENSNVIP00000004453	LSM10, U7 small nuclear RNA associated.	annotation not available	0.984
ENSNVIP00000016071	ENSNVIP00000014897	ENSNVIP00000016071	ENSNVIP00000014897	LSM10, U7 small nuclear RNA associated.	annotation not available	0.970