Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CNTN6Contactin 6. (1027 aa)    
Predicted Functional Partners:
PTPRG
Protein tyrosine phosphatase receptor type G.
    
 
 0.909
CHL1
Cell adhesion molecule L1 like.
   
 0.751
NRCAM
Neuronal cell adhesion molecule.
   
 0.751
L1CAM
L1 cell adhesion molecule.
   
 0.705
NFASC
Neurofascin.
   
 0.618
APP
Amyloid beta precursor protein.
   
 
 0.605
ALCAM
Activated leukocyte cell adhesion molecule.
    
 0.591
AFAP1L1
Actin filament associated protein 1 like 1.
      
 0.565
VPS53
VPS53 subunit of GARP complex.
      
 0.565
RPH3AL
Rabphilin 3A like (without C2 domains).
   
  
 0.565
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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