STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM135AFamily with sequence similarity 135 member A. (1542 aa)    
Predicted Functional Partners:
MEGF11
Multiple EGF like domains 11.
   
  
 0.694
ENSNVIP00000014757
Synaptoporin.
      
 0.570
PCDH9
Protocadherin 9.
   
  
 0.531
ONECUT1
One cut homeobox 1.
   
  
 0.479
RUSC2
RUN and SH3 domain containing 2.
      
 0.477
C1QL1
Complement C1q like 1.
      
 0.476
PPP1R42
Protein phosphatase 1 regulatory subunit 42.
      
 0.436
SYP
Synaptophysin.
      
 0.416
ENSNVIP00000025364
annotation not available
      
 0.415
TTC22
Tetratricopeptide repeat domain 22.
      
 0.413
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.