Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SNRNP27Small nuclear ribonucleoprotein U4/U6.U5 subunit 27. (154 aa)    
Predicted Functional Partners:
CHERP
Calcium homeostasis endoplasmic reticulum protein.
    
   0.864
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
     
 0.841
ENSNVIP00000012892
annotation not available
   
 0.828
ENSNVIP00000023875
annotation not available
   
 0.828
RBM42
RNA binding motif protein 42.
     
  0.765
PRPF3
pre-mRNA processing factor 3.
   
 0.756
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
    
 0.715
SNRPA
Small nuclear ribonucleoprotein polypeptide A.
   
 
 0.668
SRPK1
SRSF protein kinase 1.
    
 
 0.658
SRPK2
SRSF protein kinase 2.
    
 
 0.658
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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