Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHCTF1AT-hook containing transcription factor 1. (2311 aa)    
Predicted Functional Partners:
NUP107
Nucleoporin 107.
    
 0.996
ENSNVIP00000030450
Nucleoporin 133.
   
 0.996
NUP160
Nucleoporin 160.
   
 0.992
NUP98
Nucleoporin 98.
   
 0.984
ENSNVIP00000028723
Nucleoporin 43.
    
 0.983
ENSNVIP00000013023
Nucleoporin 37.
    
 0.981
NUP85
Nucleoporin 85.
    
 0.980
SEH1L
SEH1 like nucleoporin.
   
 0.978
ENSNVIP00000031364
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.975
ENSNVIP00000010288
Nucleoporin 35.
    
 0.968
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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