STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HACE1HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1. (909 aa)    
Predicted Functional Partners:
ENSNVIP00000008604
annotation not available
    
 0.840
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.784
ALYREF
Aly/REF export factor.
    
 
 0.751
KIAA1324
KIAA1324.
    
 
 0.742
ENSNVIP00000003240
annotation not available
    
 0.709
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.709
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
   
   0.702
ENSNVIP00000012666
annotation not available
    
 0.694
ENSNVIP00000014893
annotation not available
    
 0.694
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
    
 0.694
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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