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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOXThymocyte selection associated high mobility group box. (526 aa)    
Predicted Functional Partners:
ACTR8
Actin related protein 8.
    
 0.589
ENSNVIP00000024300
General transcription factor IIH subunit 1.
    
 0.566
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
   
 0.559
ACTL6A
Actin like 6A.
   
 0.548
POLRMT
RNA polymerase mitochondrial.
    
 0.544
ENSNVIP00000009876
SLIT and NTRK like family member 3.
     
 0.544
ACTR5
Actin related protein 5.
    
 0.543
RUVBL1
RuvB like AAA ATPase 1.
    
 0.539
ENSNVIP00000016929
annotation not available
   
  
 0.523
ENSNVIP00000028440
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4.
   
  
 0.523
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.