STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D22ATBC1 domain family member 22A. (517 aa)    
Predicted Functional Partners:
ACBD3
acyl-CoA binding domain containing 3.
    
 
 0.931
MICU1
Mitochondrial calcium uptake 1.
    
   0.747
ENSNVIP00000003933
annotation not available
    
 
 0.719
ENSNVIP00000018961
RAB1B, member RAS oncogene family.
    
 
 0.719
MRPS9
Mitochondrial ribosomal protein S9.
    
 
 0.708
MRPS5
Mitochondrial ribosomal protein S5.
   
   0.676
MRPS16
Mitochondrial ribosomal protein S16.
    
   0.669
ENSNVIP00000026956
Component of oligomeric golgi complex 6.
    
   0.659
MRPS6
Mitochondrial ribosomal protein S6.
    
   0.658
DAP3
Death associated protein 3.
    
   0.658
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.