STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC29Tetratricopeptide repeat domain 29. (498 aa)    
Predicted Functional Partners:
CCDC40
Coiled-coil domain containing 40.
   
 
 0.857
DNAH1
Dynein axonemal heavy chain 1.
   
  
 0.795
CEP135
Centrosomal protein 135.
      
 0.743
CFAP43
Cilia and flagella associated protein 43.
   
  
 0.688
C11orf88
Chromosome 11 open reading frame 88.
   
    0.681
DNAH17
Dynein axonemal heavy chain 17.
   
  
 0.667
TTC21A
Tetratricopeptide repeat domain 21A.
   
  
 0.641
DNAH5
Dynein axonemal heavy chain 5.
   
  
 0.615
DNAH8
Dynein axonemal heavy chain 8.
   
  
 0.615
SOGA1
Suppressor of glucose, autophagy associated 1.
      
 0.614
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.