STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000004612Cochlin. (550 aa)    
Predicted Functional Partners:
VIT
Vitrin.
    
   0.832
CLCA2
Chloride channel accessory 2.
    
 0.771
SLC17A8
Solute carrier family 17 member 8.
      
 0.705
TMC1
Transmembrane channel like 1.
    
 0.687
ENSNVIP00000022484
RPGRIP1 like.
    
 
 0.682
SRRM4
Serine/arginine repetitive matrix 4.
    
 0.651
SLC26A5
Solute carrier family 26 member 5.
   
  
 0.646
ADGRV1
Adhesion G protein-coupled receptor V1.
    
 0.635
TECTB
Tectorin beta.
      
 0.611
STOX1
Storkhead box 1.
      
 0.607
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.