STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RHBDD3Rhomboid domain containing 3. (384 aa)    
Predicted Functional Partners:
ENSNVIP00000027645
Family with sequence similarity 118 member A.
    
 0.776
BLOC1S3
Biogenesis of lysosomal organelles complex 1 subunit 3.
      
 0.691
LETM2
Leucine zipper and EF-hand containing transmembrane protein 2.
      
 0.658
PIBF1
Progesterone immunomodulatory binding factor 1.
      
 0.641
ENSNVIP00000018248
DnaJ heat shock protein family (Hsp40) member C18.
      
 0.639
PLD6
Phospholipase D family member 6.
   
  
 0.594
ENSNVIP00000004862
annotation not available
      
 0.544
FLT3LG
Fms related tyrosine kinase 3 ligand.
   
  
 0.540
ENSNVIP00000005508
annotation not available
      
 0.539
ENSNVIP00000031546
annotation not available
      
 0.536
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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