Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRDX2Peroxiredoxin 2. (198 aa)    
Predicted Functional Partners:
SRXN1
Sulfiredoxin 1.
   
 0.919
PRDX5
Peroxiredoxin 5.
   
 0.911
TXN
Thioredoxin.
   
 0.905
ENSNVIP00000012881
annotation not available
   
 0.861
NME8
NME/NM23 family member 8.
  
 0.815
TXNDC8
Thioredoxin domain containing 8.
   
 0.790
PRDX4
Peroxiredoxin 4.
   
   0.749
ENSNVIP00000004447
Thioredoxin 2.
   
 0.719
ENSNVIP00000012825
annotation not available
  
 
 0.711
NDUFA13
NADH:ubiquinone oxidoreductase subunit A13.
   
  
 0.698
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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