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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000004709Blood vessel epicardial substance. (360 aa)    
Predicted Functional Partners:
TJP1
Tight junction protein 1.
     
 0.946
ENSNVIP00000026381
Transmembrane protein 45B.
      
 0.656
CRB3
Crumbs cell polarity complex component 3.
      
 0.613
ADSS1
Adenylosuccinate synthase 1.
      
 0.519
GOT1L1
Glutamic-oxaloacetic transaminase 1 like 1.
      
 0.519
MARVELD3
MARVEL domain containing 3.
      
 0.482
ENSNVIP00000016692
annotation not available
      
 0.454
ENSNVIP00000025729
TBCC domain containing 1.
      
 0.416
ICMT
Isoprenylcysteine carboxyl methyltransferase.
      
 0.408
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.