STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000004716annotation not available (88 aa)    
Predicted Functional Partners:
GRWD1
Glutamate rich WD repeat containing 1.
   
  
 0.539
WDR43
WD repeat domain 43.
   
    0.526
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
  
 0.506
ENSNVIP00000006997
annotation not available
   
 
 0.505
RPF2
Ribosome production factor 2 homolog.
   
 
 0.505
NLE1
Notchless homolog 1.
   
  
 0.490
GTPBP4
GTP binding protein 4.
   
  
 0.480
ENSNVIP00000009026
annotation not available
   
    0.479
RRP12
Ribosomal RNA processing 12 homolog.
   
    0.479
SDAD1
SDA1 domain containing 1.
   
    0.478
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.