STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOPAZ1Testis and ovary specific PAZ domain containing 1. (1630 aa)    
Predicted Functional Partners:
TUBGCP4
Tubulin gamma complex associated protein 4.
    
 0.724
NEDD1
NEDD1 gamma-tubulin ring complex targeting factor.
    
 0.699
TUBGCP2
Tubulin gamma complex associated protein 2.
   
 0.674
NME8
NME/NM23 family member 8.
   
 0.657
TUBGCP3
Tubulin gamma complex associated protein 3.
    
 0.655
TUBGCP6
Tubulin gamma complex associated protein 6.
    
 0.655
CDYL
Chromodomain Y like.
   
 
 0.652
CDYL2
Chromodomain Y like 2.
   
 
 0.652
MRPL3
Mitochondrial ribosomal protein L3.
   
 
 0.642
ENSNVIP00000005636
annotation not available
   
 0.640
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.