C17orf58 protein (Neovison vison) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

C17orf58

Chromosome 17 open reading frame 58. (97 aa)

Predicted Functional Partners:

MYSM1

0.786

SMARCB1

0.733

ACTL6A

0.721

PBRM1

0.721

ARID2

0.642

CYBC1

0.637

ZACN

0.608

PHF10

0.588

ARID1B

0.581

ARID1A

0.581

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTL6A	ARID1A	ENSNVIP00000022661	ENSNVIP00000030778	Actin like 6A.	AT-rich interaction domain 1A.	0.985
ACTL6A	ARID1B	ENSNVIP00000022661	ENSNVIP00000011277	Actin like 6A.	AT-rich interaction domain 1B.	0.979
ACTL6A	ARID2	ENSNVIP00000022661	ENSNVIP00000008067	Actin like 6A.	AT-rich interaction domain 2.	0.985
ACTL6A	C17orf58	ENSNVIP00000022661	ENSNVIP00000004766	Actin like 6A.	Chromosome 17 open reading frame 58.	0.721
ACTL6A	MYSM1	ENSNVIP00000022661	ENSNVIP00000011092	Actin like 6A.	Myb like, SWIRM and MPN domains 1.	0.869
ACTL6A	PBRM1	ENSNVIP00000022661	ENSNVIP00000030172	Actin like 6A.	Polybromo 1.	0.990
ACTL6A	PHF10	ENSNVIP00000022661	ENSNVIP00000001634	Actin like 6A.	PHD finger protein 10.	0.993
ACTL6A	SMARCB1	ENSNVIP00000022661	ENSNVIP00000027723	Actin like 6A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.	0.998
ARID1A	ACTL6A	ENSNVIP00000030778	ENSNVIP00000022661	AT-rich interaction domain 1A.	Actin like 6A.	0.985
ARID1A	ARID1B	ENSNVIP00000030778	ENSNVIP00000011277	AT-rich interaction domain 1A.	AT-rich interaction domain 1B.	0.963
ARID1A	ARID2	ENSNVIP00000030778	ENSNVIP00000008067	AT-rich interaction domain 1A.	AT-rich interaction domain 2.	0.884
ARID1A	C17orf58	ENSNVIP00000030778	ENSNVIP00000004766	AT-rich interaction domain 1A.	Chromosome 17 open reading frame 58.	0.581
ARID1A	MYSM1	ENSNVIP00000030778	ENSNVIP00000011092	AT-rich interaction domain 1A.	Myb like, SWIRM and MPN domains 1.	0.816
ARID1A	PBRM1	ENSNVIP00000030778	ENSNVIP00000030172	AT-rich interaction domain 1A.	Polybromo 1.	0.926
ARID1A	PHF10	ENSNVIP00000030778	ENSNVIP00000001634	AT-rich interaction domain 1A.	PHD finger protein 10.	0.979
ARID1A	SMARCB1	ENSNVIP00000030778	ENSNVIP00000027723	AT-rich interaction domain 1A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.	0.992
ARID1B	ACTL6A	ENSNVIP00000011277	ENSNVIP00000022661	AT-rich interaction domain 1B.	Actin like 6A.	0.979
ARID1B	ARID1A	ENSNVIP00000011277	ENSNVIP00000030778	AT-rich interaction domain 1B.	AT-rich interaction domain 1A.	0.963
ARID1B	ARID2	ENSNVIP00000011277	ENSNVIP00000008067	AT-rich interaction domain 1B.	AT-rich interaction domain 2.	0.873
ARID1B	C17orf58	ENSNVIP00000011277	ENSNVIP00000004766	AT-rich interaction domain 1B.	Chromosome 17 open reading frame 58.	0.581