Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNX8Sorting nexin 8. (483 aa)    
Predicted Functional Partners:
MSH3
mutS homolog 3.
    
   0.937
VPS35
VPS35 retromer complex component.
   
 0.921
SNX6
Sorting nexin 6.
   
 0.839
SNX1
Sorting nexin 1.
    
 0.820
SNX5
Sorting nexin 5.
   
 0.819
IGF2R
Insulin like growth factor 2 receptor.
    
 0.792
SNX32
Sorting nexin 32.
   
 0.759
TMEM203
Transmembrane protein 203.
      
 0.747
VPS26A
VPS26, retromer complex component A.
   
 0.740
VPS26B
VPS26, retromer complex component B.
   
 0.719
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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