STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCEA1Transcription elongation factor A1. (302 aa)    
Predicted Functional Partners:
SUPT6H
SPT6 homolog, histone chaperone and transcription elongation factor.
   
 0.985
ENSNVIP00000004186
annotation not available
    
 0.980
IWS1
Interacts with SUPT6H, CTD assembly factor 1.
   
 0.971
POLR2I
RNA polymerase II subunit I.
   
 0.968
POLR2E
RNA polymerase II subunit E.
   
 0.959
POLR2B
RNA polymerase II subunit B.
   
 0.955
GTF2F1
General transcription factor IIF subunit 1.
   
 0.954
POLR2K
RNA polymerase II subunit K.
   
 0.950
POLR2H
RNA polymerase II subunit H.
   
 0.945
ENSNVIP00000026782
RNA polymerase II subunit G.
   
 0.944
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.