STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LTN1Listerin E3 ubiquitin protein ligase 1. (1765 aa)    
Predicted Functional Partners:
NEMF
Nuclear export mediator factor.
    
 
 0.966
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.865
ENSNVIP00000010816
Ermin.
    
 
 0.859
ENSNVIP00000025515
Ubiquitin protein ligase E3 component n-recognin 1.
   
 0.846
SBNO1
Strawberry notch homolog 1.
   
    0.842
TCF25
Transcription factor 25.
   
 
 0.788
MINDY2
MINDY lysine 48 deubiquitinase 2.
   
  
 0.782
RC3H2
Ring finger and CCCH-type domains 2.
   
  
 0.761
RNF126
Ring finger protein 126.
   
 0.751
CEP350
Centrosomal protein 350.
   
    0.735
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.