Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRDM1PR/SET domain 1. (832 aa)    
Predicted Functional Partners:
TFAP2C
Transcription factor AP-2 gamma.
     
 0.883
EHMT2
Euchromatic histone lysine methyltransferase 2.
    
 0.880
BMX
BMX non-receptor tyrosine kinase.
    
 0.868
SOX17
SRY-box transcription factor 17.
    
 0.854
KIZ
Kizuna centrosomal protein.
    
  0.830
FANCM
FA complementation group M.
    
   0.824
FBXO11
F-box protein 11.
    
 
 0.773
IRF4
Interferon regulatory factor 4.
   
 
 0.769
TP53
Tumor protein p53.
    
 0.747
NANOS3
Nanos C2HC-type zinc finger 3.
     
 0.733
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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