STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000004939Membrane associated ring-CH-type finger 8. (569 aa)    
Predicted Functional Partners:
UBE2H
Ubiquitin conjugating enzyme E2 H.
   
 
 0.788
REV1
REV1 DNA directed polymerase.
   
  
 0.643
ENSNVIP00000025515
Ubiquitin protein ligase E3 component n-recognin 1.
   
 
 0.542
GBP3
Guanylate binding protein 3.
      
 0.541
DDAH1
Dimethylarginine dimethylaminohydrolase 1.
      
 0.488
CNOT2
CCR4-NOT transcription complex subunit 2.
    
 
 0.488
ENSNVIP00000026843
Membrane associated ring-CH-type finger 5.
   
  
 0.469
UBE2J2
Ubiquitin conjugating enzyme E2 J2.
    
 
 0.468
C1QTNF12
C1q and TNF related 12.
    
 
 0.468
FBXL20
F-box and leucine rich repeat protein 20.
      
 0.463
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.