Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TARS1threonyl-tRNA synthetase 1. (723 aa)    
Predicted Functional Partners:
TARS3
threonyl-tRNA synthetase 3.
   
 0.984
TARS2
threonyl-tRNA synthetase 2, mitochondrial.
    
 0.965
LARS1
leucyl-tRNA synthetase 1.
  
 
 0.941
GARS1
glycyl-tRNA synthetase 1.
   
 
 0.886
YARS1
tyrosyl-tRNA synthetase 1.
  
 
 0.878
ENSNVIP00000007989
arginyl-tRNA synthetase 1.
  
 
 0.866
KARS1
lysyl-tRNA synthetase 1.
  
 
 0.852
IARS1
isoleucyl-tRNA synthetase 1.
  
 
 0.837
ENSNVIP00000007941
Aminoacyl tRNA synthetase complex interacting multifunctional protein 1.
  
 
 0.827
SARS1
seryl-tRNA synthetase 1.
   
 
 0.808
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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