STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CALRCalreticulin. (417 aa)    
Predicted Functional Partners:
HSP90B1
Heat shock protein 90 beta family member 1.
   
 0.999
PDIA3
Protein disulfide isomerase family A member 3.
   
 0.999
TAPBP
TAP binding protein.
    
 0.994
P4HB
Prolyl 4-hydroxylase subunit beta.
   
 0.994
PDIA4
Protein disulfide isomerase family A member 4.
   
 0.985
HSPA5
Heat shock protein family A (Hsp70) member 5.
   
 0.984
TAP1
Transporter 1, ATP binding cassette subfamily B member.
   
 0.977
ENSNVIP00000012465
annotation not available
   
 0.975
CANX
Calnexin.
   
 0.975
PDIA6
Protein disulfide isomerase family A member 6.
   
 0.951
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.