Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAD23ARAD23 homolog A, nucleotide excision repair protein. (387 aa)    
Predicted Functional Partners:
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
   
 0.993
ENSNVIP00000013710
annotation not available
    
 0.992
XPC
XPC complex subunit, DNA damage recognition and repair factor.
   
 0.983
NGLY1
N-glycanase 1.
    
 0.975
UBE3A
Ubiquitin protein ligase E3A.
   
 0.955
ENSNVIP00000008604
annotation not available
    
 0.940
XPA
XPA, DNA damage recognition and repair factor.
    
 0.923
ENSNVIP00000019554
annotation not available
   
 0.911
ENSNVIP00000019648
annotation not available
   
 0.911
VCP
Valosin containing protein.
   
 0.908
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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