Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000005050Retention in endoplasmic reticulum sorting receptor 1. (196 aa)    
Predicted Functional Partners:
TMED2
Transmembrane p24 trafficking protein 2.
   
 
 0.829
COPB2
Coatomer protein complex subunit beta 2.
   
 
 0.771
ENSNVIP00000031156
B cell receptor associated protein 31.
   
 
 0.747
SURF4
Surfeit 4.
   
 
 0.728
ENSNVIP00000012465
annotation not available
    
 
 0.703
CANX
Calnexin.
    
 
 0.703
CLGN
Calmegin.
    
 
 0.703
DDOST
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit.
   
   0.699
TMED10
Transmembrane p24 trafficking protein 10.
   
 
 0.665
ENSNVIP00000030925
Syntaxin 12.
    
   0.632
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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