Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RTN4IP1Reticulon 4 interacting protein 1. (396 aa)    
Predicted Functional Partners:
ZYX
Zyxin.
    
   0.869
PYM1
PYM homolog 1, exon junction complex associated factor.
    
   0.868
ACADM
acyl-CoA dehydrogenase medium chain.
   
 0.649
RTN4
Reticulon 4.
    
 
 0.646
C12orf4
Chromosome 12 open reading frame 4.
   
   0.634
GATD1
Glutamine amidotransferase like class 1 domain containing 1.
   
   0.633
HSDL2
Hydroxysteroid dehydrogenase like 2.
  
 0.619
ENSNVIP00000003486
Transmembrane protein 126A.
   
  
 0.613
NUP205
Nucleoporin 205.
   
  
 0.599
QRSL1
glutaminyl-tRNA amidotransferase subunit QRSL1.
   
  
 0.590
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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