Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HELQHelicase, POLQ like. (1017 aa)    
Predicted Functional Partners:
POLN
DNA polymerase nu.
 
  
 
 0.946
FANCD2
FA complementation group D2.
   
 0.902
FANCM
FA complementation group M.
   
 
 0.715
ENSNVIP00000021678
annotation not available
  
 
 0.707
ENSNVIP00000027784
Flap structure-specific endonuclease 1.
  
 
 0.675
ENSNVIP00000024373
Proliferating cell nuclear antigen.
   
 
 0.670
FANCL
FA complementation group L.
     
 0.664
ENSNVIP00000022866
annotation not available
   
 
 0.660
ENSNVIP00000014101
DNA polymerase alpha 1, catalytic subunit.
   
 
 0.630
FANCI
FA complementation group I.
   
 0.627
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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