KRT84 protein (Neovison vison) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

KRT84

Keratin 84. (594 aa)

Predicted Functional Partners:

DSG4

0.913

KRT85

0.815

DSG3

0.768

DSG2

0.768

ENSNVIP00000024980

0.764

ENSNVIP00000025007

0.764

KRT7

0.677

UNC79

0.628

KRT82

0.610

MCRS1

0.571

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DSG2	DSG3	ENSNVIP00000025149	ENSNVIP00000025118	Desmoglein 2.	Desmoglein 3.	0.761
DSG2	DSG4	ENSNVIP00000025149	ENSNVIP00000025051	Desmoglein 2.	Desmoglein 4.	0.775
DSG2	ENSNVIP00000024980	ENSNVIP00000025149	ENSNVIP00000024980	Desmoglein 2.	annotation not available	0.729
DSG2	ENSNVIP00000025007	ENSNVIP00000025149	ENSNVIP00000025007	Desmoglein 2.	annotation not available	0.729
DSG2	KRT7	ENSNVIP00000025149	ENSNVIP00000005349	Desmoglein 2.	Keratin 7.	0.764
DSG2	KRT82	ENSNVIP00000025149	ENSNVIP00000005095	Desmoglein 2.	Keratin 82.	0.771
DSG2	KRT84	ENSNVIP00000025149	ENSNVIP00000005123	Desmoglein 2.	Keratin 84.	0.768
DSG2	KRT85	ENSNVIP00000025149	ENSNVIP00000005163	Desmoglein 2.	Keratin 85.	0.763
DSG3	DSG2	ENSNVIP00000025118	ENSNVIP00000025149	Desmoglein 3.	Desmoglein 2.	0.761
DSG3	DSG4	ENSNVIP00000025118	ENSNVIP00000025051	Desmoglein 3.	Desmoglein 4.	0.761
DSG3	ENSNVIP00000024980	ENSNVIP00000025118	ENSNVIP00000024980	Desmoglein 3.	annotation not available	0.657
DSG3	ENSNVIP00000025007	ENSNVIP00000025118	ENSNVIP00000025007	Desmoglein 3.	annotation not available	0.657
DSG3	KRT7	ENSNVIP00000025118	ENSNVIP00000005349	Desmoglein 3.	Keratin 7.	0.764
DSG3	KRT82	ENSNVIP00000025118	ENSNVIP00000005095	Desmoglein 3.	Keratin 82.	0.771
DSG3	KRT84	ENSNVIP00000025118	ENSNVIP00000005123	Desmoglein 3.	Keratin 84.	0.768
DSG3	KRT85	ENSNVIP00000025118	ENSNVIP00000005163	Desmoglein 3.	Keratin 85.	0.763
DSG4	DSG2	ENSNVIP00000025051	ENSNVIP00000025149	Desmoglein 4.	Desmoglein 2.	0.775
DSG4	DSG3	ENSNVIP00000025051	ENSNVIP00000025118	Desmoglein 4.	Desmoglein 3.	0.761
DSG4	ENSNVIP00000024980	ENSNVIP00000025051	ENSNVIP00000024980	Desmoglein 4.	annotation not available	0.761
DSG4	ENSNVIP00000025007	ENSNVIP00000025051	ENSNVIP00000025007	Desmoglein 4.	annotation not available	0.761