Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DDX6DEAD-box helicase 6. (483 aa)    
Predicted Functional Partners:
EDC4
Enhancer of mRNA decapping 4.
   
 0.998
ENSNVIP00000016398
Enhancer of mRNA decapping 3.
   
 0.998
DCP1A
Decapping mRNA 1A.
   
 0.998
DCP2
Decapping mRNA 2.
   
 0.995
DCP1B
Decapping mRNA 1B.
   
 0.993
LSM14A
LSM14A mRNA processing body assembly factor.
   
 
 0.982
AGO2
Argonaute RISC catalytic component 2.
   
 0.981
LSM1
LSM1 homolog, mRNA degradation associated.
   
 0.969
ATXN2L
Ataxin 2 like.
    
 
 0.966
LSM14B
LSM family member 14B.
   
 
 0.963
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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