STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOM1Target of myb1 membrane trafficking protein. (511 aa)    
Predicted Functional Partners:
TOLLIP
Toll interacting protein.
   
 
 0.907
MYO6
Myosin VI.
    
 
 0.885
ZFYVE16
Zinc finger FYVE-type containing 16.
    
 
 0.759
CUEDC1
CUE domain containing 1.
    
   0.745
ENSNVIP00000008604
annotation not available
    
   0.653
URGCP
Upregulator of cell proliferation.
    
   0.645
TNFAIP8L2
TNF alpha induced protein 8 like 2.
      
 0.639
ARF6
ADP ribosylation factor 6.
    
 0.627
ENSNVIP00000003078
ADP ribosylation factor like GTPase 15.
    
 0.627
CLTC
Clathrin heavy chain.
    
 
 0.612
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.