Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MBD5methyl-CpG binding domain protein 5. (1734 aa)    
Predicted Functional Partners:
ASXL2
ASXL transcriptional regulator 2.
   
 0.953
BAP1
BRCA1 associated protein 1.
    
 0.935
ENSNVIP00000025261
Lysine demethylase 1B.
   
 0.835
FOXK1
Forkhead box K1.
    
 0.722
FOXK2
Forkhead box K2.
    
 0.722
ASXL1
ASXL transcriptional regulator 1.
   
 0.685
ASXL3
ASXL transcriptional regulator 3.
   
 0.677
HCFC2
Host cell factor C2.
    
 0.668
HCFC1
Host cell factor C1.
    
 0.668
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
    
  0.644
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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