STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000005156Coiled-coil domain containing 184. (193 aa)    
Predicted Functional Partners:
LGI2
Leucine rich repeat LGI family member 2.
      
 0.519
TBC1D30
TBC1 domain family member 30.
      
 0.513
RIMKLA
Ribosomal modification protein rimK like family member A.
      
 0.512
ENSNVIP00000007214
Proline rich 15 like.
      
 0.483
ENSNVIP00000018872
RNA pseudouridine synthase D3.
      
 0.472
ENSNVIP00000001475
annotation not available
      
 0.471
ENSNVIP00000005177
Ankyrin repeat and SOCS box containing 8.
      
 0.459
ENSNVIP00000018005
annotation not available
      
 0.447
ENSNVIP00000018052
annotation not available
      
 0.447
ENSNVIP00000032213
B9 domain containing 1.
      
 0.442
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.