Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HPSEHeparanase. (540 aa)    
Predicted Functional Partners:
SDC1
Syndecan 1.
     
 0.960
HPSE2
Heparanase 2 (inactive).
     
 0.895
ENSNVIP00000023906
annotation not available
     
 0.882
CTSV
Cathepsin V.
   
 
 0.697
SDC3
Syndecan 3.
     
 0.680
NR2C2
Nuclear receptor subfamily 2 group C member 2.
    
   0.628
GPC1
Glypican 1.
     
 0.611
SDC4
Syndecan 4.
     
 0.580
GPC3
Glypican 3.
     
 0.574
GPC5
Glypican 5.
     
 0.565
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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