ENSNVIP00000005189 protein (Neovison vison) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

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Textmining

[Homology]

Score

ENSNVIP00000005189

annotation not available (493 aa)

Predicted Functional Partners:

DSG4

0.747

ENSNVIP00000024980

0.580

ENSNVIP00000025007

0.580

DSG3

0.580

DSG2

0.580

KRT39

0.560

KRT85

0.476

NME8

0.462

KRT27

0.461

WDR90

0.461

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DSG2	DSG3	ENSNVIP00000025149	ENSNVIP00000025118	Desmoglein 2.	Desmoglein 3.	0.761
DSG2	DSG4	ENSNVIP00000025149	ENSNVIP00000025051	Desmoglein 2.	Desmoglein 4.	0.775
DSG2	ENSNVIP00000005189	ENSNVIP00000025149	ENSNVIP00000005189	Desmoglein 2.	annotation not available	0.580
DSG2	ENSNVIP00000024980	ENSNVIP00000025149	ENSNVIP00000024980	Desmoglein 2.	annotation not available	0.729
DSG2	ENSNVIP00000025007	ENSNVIP00000025149	ENSNVIP00000025007	Desmoglein 2.	annotation not available	0.729
DSG2	KRT85	ENSNVIP00000025149	ENSNVIP00000005163	Desmoglein 2.	Keratin 85.	0.763
DSG3	DSG2	ENSNVIP00000025118	ENSNVIP00000025149	Desmoglein 3.	Desmoglein 2.	0.761
DSG3	DSG4	ENSNVIP00000025118	ENSNVIP00000025051	Desmoglein 3.	Desmoglein 4.	0.761
DSG3	ENSNVIP00000005189	ENSNVIP00000025118	ENSNVIP00000005189	Desmoglein 3.	annotation not available	0.580
DSG3	ENSNVIP00000024980	ENSNVIP00000025118	ENSNVIP00000024980	Desmoglein 3.	annotation not available	0.657
DSG3	ENSNVIP00000025007	ENSNVIP00000025118	ENSNVIP00000025007	Desmoglein 3.	annotation not available	0.657
DSG3	KRT85	ENSNVIP00000025118	ENSNVIP00000005163	Desmoglein 3.	Keratin 85.	0.763
DSG4	DSG2	ENSNVIP00000025051	ENSNVIP00000025149	Desmoglein 4.	Desmoglein 2.	0.775
DSG4	DSG3	ENSNVIP00000025051	ENSNVIP00000025118	Desmoglein 4.	Desmoglein 3.	0.761
DSG4	ENSNVIP00000005189	ENSNVIP00000025051	ENSNVIP00000005189	Desmoglein 4.	annotation not available	0.747
DSG4	ENSNVIP00000024980	ENSNVIP00000025051	ENSNVIP00000024980	Desmoglein 4.	annotation not available	0.761
DSG4	ENSNVIP00000025007	ENSNVIP00000025051	ENSNVIP00000025007	Desmoglein 4.	annotation not available	0.761
DSG4	KRT39	ENSNVIP00000025051	ENSNVIP00000002032	Desmoglein 4.	Keratin 39.	0.435
DSG4	KRT85	ENSNVIP00000025051	ENSNVIP00000005163	Desmoglein 4.	Keratin 85.	0.566
ENSNVIP00000005189	DSG2	ENSNVIP00000005189	ENSNVIP00000025149	annotation not available	Desmoglein 2.	0.580