Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARHGEF16Rho guanine nucleotide exchange factor 16. (709 aa)    
Predicted Functional Partners:
MAGI2
Membrane associated guanylate kinase, WW and PDZ domain containing 2.
    
   0.839
FMNL3
Formin like 3.
      
 0.703
ALS2
Alsin Rho guanine nucleotide exchange factor ALS2.
    
 
 0.702
ENSNVIP00000024744
Ras homolog family member G.
    
 0.701
ARHGEF38
Rho guanine nucleotide exchange factor 38.
     
 0.679
IQGAP2
IQ motif containing GTPase activating protein 2.
      
 0.648
MYO9B
Myosin IXB.
      
 0.636
ENSNVIP00000007379
annotation not available
     
 0.626
ECT2
Epithelial cell transforming 2.
     
 0.605
AKAP13
A-kinase anchoring protein 13.
    
 0.596
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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