STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM170AFamily with sequence similarity 170 member A. (329 aa)    
Predicted Functional Partners:
CSNK1A1
Casein kinase 1 alpha 1.
    
   0.829
SPC24
SPC24 component of NDC80 kinetochore complex.
    
   0.829
VAPA
VAMP associated protein A.
    
   0.828
ENSNVIP00000006265
SPC25 component of NDC80 kinetochore complex.
    
   0.734
ZNF358
Zinc finger protein 358.
    
   0.667
USP7
Ubiquitin specific peptidase 7.
    
   0.628
VAPB
VAMP associated protein B and C.
    
   0.624
ENSNVIP00000021003
annotation not available
   
  
 0.576
SPEM1
Spermatid maturation 1.
   
  
 0.571
ZMYND19
Zinc finger MYND-type containing 19.
      
 0.558
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.