Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GATAD1GATA zinc finger domain containing 1. (270 aa)    
Predicted Functional Partners:
ENSNVIP00000021159
PHD finger protein 12.
    
 
 0.969
EMSY
EMSY transcriptional repressor, BRCA2 interacting.
    
 
 0.942
SIN3A
SIN3 transcription regulator family member A.
    
 
 0.832
SIN3B
SIN3 transcription regulator family member B.
    
 
 0.830
YWHAE
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon.
    
   0.829
ENSNVIP00000003154
annotation not available
    
 
 0.741
MORF4L1
Mortality factor 4 like 1.
    
 
 0.741
MORF4L2
Mortality factor 4 like 2.
    
 
 0.741
HDAC2
Histone deacetylase 2.
    
 
 0.713
ENSNVIP00000009507
annotation not available
    
 
 0.696
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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