IGHM protein (Neovison vison) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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[Homology]

Score

IGHM

Immunoglobulin heavy constant mu. (454 aa)

Predicted Functional Partners:

PIGR

0.837

SYK

0.824

ENSNVIP00000031471

0.787

FCER1G

0.768

ENSNVIP00000007856

0.760

ENSNVIP00000013295

0.742

IGHV6-1

0.739

LYN

0.739

FCER1A

0.735

ENSNVIP00000031468

0.732

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSNVIP00000007856	ENSNVIP00000013295	ENSNVIP00000007856	ENSNVIP00000013295	annotation not available	annotation not available	0.422
ENSNVIP00000007856	ENSNVIP00000031468	ENSNVIP00000007856	ENSNVIP00000031468	annotation not available	annotation not available	0.825
ENSNVIP00000007856	ENSNVIP00000031471	ENSNVIP00000007856	ENSNVIP00000031471	annotation not available	annotation not available	0.824
ENSNVIP00000007856	FCER1A	ENSNVIP00000007856	ENSNVIP00000000081	annotation not available	Fc fragment of IgE receptor Ia.	0.826
ENSNVIP00000007856	FCER1G	ENSNVIP00000007856	ENSNVIP00000002415	annotation not available	Fc fragment of IgE receptor Ig.	0.824
ENSNVIP00000007856	IGHM	ENSNVIP00000007856	ENSNVIP00000005310	annotation not available	Immunoglobulin heavy constant mu.	0.760
ENSNVIP00000007856	LYN	ENSNVIP00000007856	ENSNVIP00000017861	annotation not available	LYN proto-oncogene, Src family tyrosine kinase.	0.825
ENSNVIP00000007856	PIGR	ENSNVIP00000007856	ENSNVIP00000015329	annotation not available	Polymeric immunoglobulin receptor.	0.882
ENSNVIP00000007856	SYK	ENSNVIP00000007856	ENSNVIP00000020180	annotation not available	Spleen associated tyrosine kinase.	0.886
ENSNVIP00000013295	ENSNVIP00000007856	ENSNVIP00000013295	ENSNVIP00000007856	annotation not available	annotation not available	0.422
ENSNVIP00000013295	ENSNVIP00000031468	ENSNVIP00000013295	ENSNVIP00000031468	annotation not available	annotation not available	0.750
ENSNVIP00000013295	ENSNVIP00000031471	ENSNVIP00000013295	ENSNVIP00000031471	annotation not available	annotation not available	0.749
ENSNVIP00000013295	FCER1A	ENSNVIP00000013295	ENSNVIP00000000081	annotation not available	Fc fragment of IgE receptor Ia.	0.490
ENSNVIP00000013295	FCER1G	ENSNVIP00000013295	ENSNVIP00000002415	annotation not available	Fc fragment of IgE receptor Ig.	0.751
ENSNVIP00000013295	IGHM	ENSNVIP00000013295	ENSNVIP00000005310	annotation not available	Immunoglobulin heavy constant mu.	0.742
ENSNVIP00000013295	IGHV6-1	ENSNVIP00000013295	ENSNVIP00000008953	annotation not available	Immunoglobulin heavy variable 6-1.	0.408
ENSNVIP00000013295	LYN	ENSNVIP00000013295	ENSNVIP00000017861	annotation not available	LYN proto-oncogene, Src family tyrosine kinase.	0.750
ENSNVIP00000013295	PIGR	ENSNVIP00000013295	ENSNVIP00000015329	annotation not available	Polymeric immunoglobulin receptor.	0.741
ENSNVIP00000013295	SYK	ENSNVIP00000013295	ENSNVIP00000020180	annotation not available	Spleen associated tyrosine kinase.	0.838
ENSNVIP00000031468	ENSNVIP00000007856	ENSNVIP00000031468	ENSNVIP00000007856	annotation not available	annotation not available	0.825