Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRABDTraB domain containing. (418 aa)    
Predicted Functional Partners:
OSTM1
Osteoclastogenesis associated transmembrane protein 1.
      
 0.754
WDYHV1
WDYHV motif containing 1.
      
 0.754
COPZ2
Coatomer protein complex subunit zeta 2.
      
 0.754
NUDT22
Nudix hydrolase 22.
      
 0.753
ENSNVIP00000010117
annotation not available
      
 0.736
TTC7B
Tetratricopeptide repeat domain 7B.
      
 0.671
CEP76
Centrosomal protein 76.
      
 0.658
LARGE2
LARGE xylosyl- and glucuronyltransferase 2.
      
 0.638
QPCTL
Glutaminyl-peptide cyclotransferase like.
      
 0.613
COPZ1
Coatomer protein complex subunit zeta 1.
      
 0.561
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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