Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SOBPSine oculis binding protein homolog. (870 aa)    
Predicted Functional Partners:
ENSNVIP00000022484
RPGRIP1 like.
    
   0.628
MTRES1
Mitochondrial transcription rescue factor 1.
      
 0.557
PTK7
Protein tyrosine kinase 7 (inactive).
      
 0.534
CCDC40
Coiled-coil domain containing 40.
      
 0.533
PACSIN1
Protein kinase C and casein kinase substrate in neurons 1.
      
 0.514
RTN4IP1
Reticulon 4 interacting protein 1.
      
 0.488
QRSL1
glutaminyl-tRNA amidotransferase subunit QRSL1.
      
 0.488
VANGL2
VANGL planar cell polarity protein 2.
      
 0.480
SEC63
SEC63 homolog, protein translocation regulator.
      
 0.475
ENSNVIP00000011815
Sprouty RTK signaling antagonist 1.
      
 0.475
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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