ENSNVIP00000005352 protein (Neovison vison) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSNVIP00000005352

annotation not available (470 aa)

Predicted Functional Partners:

ENSNVIP00000029738

0.616

ENSNVIP00000005389

0.464

ENSNVIP00000029645

0.444

ENSNVIP00000020490

0.434

NLRP13

0.416

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

Export your current network:

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same PNG format, but at higher resolution

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSNVIP00000005352	ENSNVIP00000005389	ENSNVIP00000005352	ENSNVIP00000005389	annotation not available	annotation not available	0.464
ENSNVIP00000005352	ENSNVIP00000020490	ENSNVIP00000005352	ENSNVIP00000020490	annotation not available	annotation not available	0.434
ENSNVIP00000005352	ENSNVIP00000029645	ENSNVIP00000005352	ENSNVIP00000029645	annotation not available	annotation not available	0.444
ENSNVIP00000005352	ENSNVIP00000029738	ENSNVIP00000005352	ENSNVIP00000029738	annotation not available	annotation not available	0.616
ENSNVIP00000005352	NLRP13	ENSNVIP00000005352	ENSNVIP00000016140	annotation not available	NLR family pyrin domain containing 13.	0.416
ENSNVIP00000005389	ENSNVIP00000005352	ENSNVIP00000005389	ENSNVIP00000005352	annotation not available	annotation not available	0.464
ENSNVIP00000005389	ENSNVIP00000029738	ENSNVIP00000005389	ENSNVIP00000029738	annotation not available	annotation not available	0.408
ENSNVIP00000020490	ENSNVIP00000005352	ENSNVIP00000020490	ENSNVIP00000005352	annotation not available	annotation not available	0.434
ENSNVIP00000029645	ENSNVIP00000005352	ENSNVIP00000029645	ENSNVIP00000005352	annotation not available	annotation not available	0.444
ENSNVIP00000029645	ENSNVIP00000029738	ENSNVIP00000029645	ENSNVIP00000029738	annotation not available	annotation not available	0.498
ENSNVIP00000029738	ENSNVIP00000005352	ENSNVIP00000029738	ENSNVIP00000005352	annotation not available	annotation not available	0.616
ENSNVIP00000029738	ENSNVIP00000005389	ENSNVIP00000029738	ENSNVIP00000005389	annotation not available	annotation not available	0.408
ENSNVIP00000029738	ENSNVIP00000029645	ENSNVIP00000029738	ENSNVIP00000029645	annotation not available	annotation not available	0.498
NLRP13	ENSNVIP00000005352	ENSNVIP00000016140	ENSNVIP00000005352	NLR family pyrin domain containing 13.	annotation not available	0.416