STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000005377annotation not available (292 aa)    
Predicted Functional Partners:
NSMCE4A
NSE4 homolog A, SMC5-SMC6 complex component.
   
 0.893
NSMCE1
NSE1 homolog, SMC5-SMC6 complex component.
   
 0.891
SMC5
Structural maintenance of chromosomes 5.
   
 0.808
ENSNVIP00000017435
annotation not available
   
 0.794
ENSNVIP00000001728
NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase.
   
 0.792
TP53
Tumor protein p53.
    
 0.766
NGFR
Nerve growth factor receptor.
    
 0.760
ENSNVIP00000026015
annotation not available
   
 
 0.732
E2F1
E2F transcription factor 1.
    
 
 0.643
RIC8B
RIC8 guanine nucleotide exchange factor B.
    
   0.628
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.