Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSNVIP00000005394RNA binding motif protein 48. (373 aa)    
Predicted Functional Partners:
ENSNVIP00000013191
Armadillo repeat containing 7.
  
 
 
 0.973
ENSNVIP00000031405
Small nuclear ribonucleoprotein U5 subunit 40.
    
 
 0.831
PRPF8
pre-mRNA processing factor 8.
    
   0.829
TUBGCP4
Tubulin gamma complex associated protein 4.
    
 0.724
SCNM1
Sodium channel modifier 1.
    
 
 0.709
NEDD1
NEDD1 gamma-tubulin ring complex targeting factor.
    
 0.699
TUBGCP2
Tubulin gamma complex associated protein 2.
   
 0.674
ENSNVIP00000022139
CXXC repeat containing interactor of PDZ3 domain.
   
 
 0.663
ENSNVIP00000029063
annotation not available
   
 
 0.658
ENSNVIP00000009640
CWC27 spliceosome associated cyclophilin.
   
   0.657
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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