STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC63SEC63 homolog, protein translocation regulator. (704 aa)    
Predicted Functional Partners:
SEC62
SEC62 homolog, preprotein translocation factor.
   
 0.996
ENSNVIP00000023368
SEC61 translocon alpha 1 subunit.
   
 
 0.986
SEC61A2
SEC61 translocon alpha 2 subunit.
   
 
 0.986
SEC61G
SEC61 translocon gamma subunit.
    
 
 0.962
SRPRA
SRP receptor subunit alpha.
   
 
 0.953
ENSNVIP00000019110
annotation not available
    
 
 0.946
ENSNVIP00000022741
annotation not available
    
 
 0.946
HYOU1
Hypoxia up-regulated 1.
  
 
 0.937
SRP54
Signal recognition particle 54.
   
  
 0.927
HSPA5
Heat shock protein family A (Hsp70) member 5.
  
 
 0.918
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.