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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGBD2piggyBac transposable element derived 2. (583 aa)    
Predicted Functional Partners:
ZBED8
Zinc finger BED-type containing 8.
      
 0.739
ZBED1
Zinc finger BED-type containing 1.
    
 
 0.658
ENSNVIP00000006232
Bet1 golgi vesicular membrane trafficking protein like.
      
 0.656
POGK
Pogo transposable element derived with KRAB domain.
      
 0.656
PGBD5
piggyBac transposable element derived 5.
    
 
 0.647
GNL1
G protein nucleolar 1 (putative).
    
 
 0.629
THAP9
THAP domain containing 9.
      
 0.613
ENSNVIP00000018884
annotation not available
   
 0.584
ENSNVIP00000031381
Zinc finger protein 385D.
      
 0.567
ENSNVIP00000013698
Nuclear apoptosis inducing factor 1.
      
 0.538
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.